PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G314200.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 449aa    MW: 47356 Da    PI: 6.6055
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G314200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.61.6e-11251296555
                        HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        h+++Er RR+ri +++  L+el+P+a      K +Ka++L + ++Y+k Lq
  Aqcoe7G314200.1.p 251 HSIAERLRRERIAERMKGLQELVPNA-----NKTDKASMLDEIIDYVKFLQ 296
                        99***********************8.....6******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.96E-16244306IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.83E-12244300No hitNo description
PROSITE profilePS5088816.964246295IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-15248305IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.1E-9251296IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.3E-13252301IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048767Biological Processroot hair elongation
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    Send to blast
MNPMSSINPS RVTLQDLQNN QEQQQQQQQI QNQIQSSSHF DHQTPPDDFL DQMLCNLPWS  60
DLHANNPKSP WVDHLNPQNP NSSNNTSSNN YDDSALLASR LRQHQISGES TKSMLLQQQL  120
LASSRTAASV AGGIGRPSSS SANNSGIGPD SAYLQTIPLT LGNGDSTNGD NSVPGLYNGF  180
TGSLARPSQL ANQHFNHSQN GSISTQNYGA ANTGMNQAPA SGNGNSGGGG GGAPPVRQRV  240
RARRGQATDP HSIAERLRRE RIAERMKGLQ ELVPNANKTD KASMLDEIID YVKFLQLQVK  300
VLSMSRLGGA AAVAPLLADI STEGGADSIQ TNGSGGRSSN GTQTAAINDS LTVTENQVAK  360
LMEEDMGSAM QYLQGKGLCL MPISLASAIS TATNHSSRNP NNNLTNPFLN SNLDGPTSPS  420
ISVLTVQSTM GNGVGETSVR DATSVSKP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1255260RLRRER
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00659PBMTransfer from Pp3c14_15890Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010275766.11e-162PREDICTED: transcription factor bHLH66
SwissprotQ9ZUG91e-85BH066_ARATH; Transcription factor bHLH66
TrEMBLF6HYI31e-158F6HYI3_VITVI; Putative uncharacterized protein
STRINGVIT_11s0037g00040.t011e-158(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.12e-51LJRHL1-like 1